SFB1032 Graduates

Institute

Gender

Funding Period

Surname, first name

Thesis title

LMU

f

1

Hertrich, Samira

Interaction of lipid and polymer films with cells: a neutron and x-ray reflectometry study

LMU

f

1

Osinkina, Lidiya

Interactions of molecules in the vicinity of gold nanoparticles.

LMU

f

1

Kick (Pflieger), Kerstin

Artificial angiogenesis: characterization of endothelial cell migration in three-dimensional model systems

LMU

m

1

Mast, Christof

Polymerization and replication of DNA/RNA in a thermal trap

LMU

m

1

Schiffels, Daniel

Design, characterization and functionalization of DNA materials

LMU

m

1

Röttgermann, Peter

Single cell motility and apoptosis dynamics on micropatterns

LMU

m

1

Reese, Louis

On the dynamics of cytoskeletal filaments

LMU

m

1

Thüroff, Florian

Collective motion in active matter: from microscopic models to macroscopic dynamics

LMU

m

1

Weig, Cornelius

Active systems at low Reynolds numbers: assemblies of driven filaments & swimming with flexible flagella

LMU

m

1

Kopp, Florian

Novel insights into the role of microRNAs in chemoresistance, tumor progression and cancer therapy

LMU

m

1

Schuster, Simon

Models for angiogenesis on micro-structured surfaces: a novel view on endothelial cell biology

MPI

f

1

Zieske, Katja

Molecular self-organization and pattern formation during bacterial cell division

TUM

f

1

Arends, Fabienna

Selective permeability properties of a basal lamina model system

TUM

m

1

Osberg, Brendan

One-dimensional lattice gasses with soft interaction: application to nucleosome positioning in yeast

TUM

m

1

Ramalho, Tiago

Information processing in biology: a study on signaling and emergent computation

LMU

f

2

Erlich, Katherine

Single-molecule directed assembly and enzyme investigation

LMU

f

2

Chopra, Aradhana

Nucleic acid nanostructures: From biomimetic assembly to in vivo applications

LMU

f

2

Möller, Friederike

Biomolecule transport in electrochemical non-equilibrium systems

LMU

f

2

Raddaoui, Nada

Entwicklung neuer Diagnostikmethoden für genetische Erkrankungen basierend auf der Click-Chemie

LMU

f

2

Roller, Eva-Maria

DNA origami templated plasmonic nanostructures

LMU

f

2

Mittag, Judith

Binding of proteins to nanoparticles in complex fluids probed by fluorescence correlation spectroscopy

LMU

f

2

Babynina, Anastasia

Bending and positioning of nanoparticles with light.

LMU

f

2

Pernpeintner, Carla

Optomechanical manipulation of particles and biological systems at the mesoscale

LMU

f

2

Balles,Miriam

Photolithographic micro-structuring of artifcial 3-dimensional hydrogel environments for cell migration studies

LMU

f

2

Berger, Ricarda

Experimental studies on multivalency: from DNA origami modelsystems to living cells

LMU

f

2

Fink, Alexandra

Cell Migration on Two-State Micropatterns

LMU

f

2

Murschhauser, Alexandra

Single-cell analysis of event-time correlations in signaling cascades

LMU

f

2

Bergeler, Silke

Positioning mechanisms in bacterial cells: midcell sensing in Myxococcus xanthus

LMU

f

2

Gessele, Clara Raphaela

Cell polarisation in geometry: the PAR protein system as a paradigmatic model for pattern formation

LMU

f

2

Graf, Isabella Ruth

Principles of self-organization and self-assembly in biologically inspired non-equilibrium systems: a conceptual approach

LMU

f

2

Madhira, Sushi

Single-molecule multi-color FRET: from DNA to protein

LMU

f

2

Müller, Katharina

Nanocarriers based on sequence-defined oligomers for tumor-targeted siRNA and miRNA delivery

LMU

f

2

Trübenbach, Ines

Drug delivery systems for pretubulysin-based combination chemotherapies

LMU

f

2

Chiu, Hsin-Yi

Synthesis and functionalization of multifunctional large-pore mesoporous silica nanoparticles for intracellular protein delivery

LMU

f

2

Dollenmayer, Dorothée

Biocompatible Nanocarriers

LMU

f

2

Nekolla, Anna Katharina

In vivo behavior of nanoparticles: impact of surface modifications on the spatiotemporal microdistribution of quantum dots

LMU

f

2

Sellner, Sabine

DNA nanotubes: intracellular delivery vehicles in vivo

LMU

m

2

Baumann, Fabian

Atomic force microscopy for high-specificity manipulations of proteins and high-throughput analysis in nanoapertures

LMU

m

2

Milles, Lukas

Mechanics of Pathogen Adhesion

LMU

m

2

Schendel, Leonard

Tether and reinforcement effects on Streptavidin-Biotin, and induced binding in nanoapertures

LMU

m

2

Schöler, Constantin

Molecular mechanisms for mechanostability in biomolecular complexe

LMU

m

2

Verdorfer, Tobias

Multiplexed single-molecule force spectroscopy and activity studies on cellulosomes

LMU

m

2

Kopperger, Enzo

DNA-based Nanoelectromechanical Systems

LMU

m

2

List, Jonathan

Reconfigurable DNA Nanostructures

LMU

m

2

Teichmann, Mario

Application of strand displacement reactions in DNA nanotechnology and synthetic biology

LMU

m

2

Keil, Lorenz

Autonomous non-equilibrium mechanisms for molecular evolution

LMU

m

2

Lanzmich, Simon

Replication in Early Evolution.

LMU

m

2

Morasch, Matthias

Accumulation, gelation, and crystallization of prebiotic molecules in a thermal gradient and deep UV circular dichroism

LMU

m

2

Urtel, Georg

Evolutionary processes in replicating DNA species.

LMU

m

2

Dialer, Clemens

Chemische Synthese und Evaluierung von 2'3'-cGAMP-Analoga

LMU

m

2

Geiger, Simon

Untersuchungen zu den Interaktionspartnern modifizierter Nukleoside in messenger RNA

LMU

m

2

Ljepoja, Bojan

Novel roles of miRNA-27a and miRNA-200c in breast cancer treatment and metastasis

LMU

m

2

Kocabey, Samet

DNA-based artificial systems for mimicking membrane-related mechanisms and targeted delivery

LMU

m

2

Maier, Alexander

DNA self-assembled filaments for micro- and nanoscale propulsion

LMU

m

2

Nickels, Philipp

Force spectroscopy with DNA origami.

LMU

m

2

Zettl, Thomas

Enhanced structural and dynamical characterization combining gold nanocrystal labels and small-angle X-ray scattering

LMU

m

2

Böhm, Philip

Neutron and X-Ray reflectometry on complex biological systems on solid surfaces

LMU

m

2

Fischer, Stefan

Small-angle X-ray scattering analysis of nanomaterials: a structural study of DNA origami, perovskite nanoparticles, and photo-switchable biomolecules

LMU

m

2

Liewald, Clemens

Microscopy and nanoscopy of organic semiconductors for structural and electronic analysis

LMU

m

2

Werkmeister, Franz

Flexible electrolyte gated organic field effect transistors for sensing

LMU

m

2

Schlichthärle, Thomas

Expanding the toolbox of DNA-PAINT microscopy: from method development to cellular applications

LMU

m

2

Schüder, Florian

Advancing and applying Next-Generation DNA-based super-resolution microscopy

LMU

m

2

Rafał Krzysztoń

Tow Towards efficient siRNA delivery and gene silencing kinetics on the single cell levelards efficient siRNA delivery

LMU

m

2

Schreiber, Christoph

1D single-cell migration on microlanes and at interfaces = 1D Einzelzellmigration auf Bahnen und an Grenzflächen

LMU

m

2

Segerer, Felix

From single-cell migration to the emergence of collective motion using microstructured surfaces

LMU

m

2

Stierle, Valentin

Phenotypic monitoring of cell growth and motility using image-based metrics and lensless microscopy

LMU

m

2

Halatek, Jakob

Towards a theory for pattern formation in reaction-diffusion systems: the geometrization of phase space flows

LMU

m

2

Lechner, Matthias

Stochasticity and heterogeneity in growing bacterial populations: from neutral evolution to stochastic toxin release

LMU

m

2

Rank, Matthias

Transport phenomena on the molecular and subcellular scale: on molecular spiders, limited resources, and motor-motor interactions

LMU

m

2

Wienand, Karl

On the role of stochastic effects in bacterial growth and sociobiology

LMU

m

2

Barth, Anders

Single-molecule fluorescence spectroscopy: from two to three colors and beyond

LMU

m

2

Schrimpf, Waldemar

Development and application of a software for analyzing advanced fluorescence spectroscopy data

LMU

m

2

Wehnekamp, Fabian

3D orbital tracking microscopy: from cells to organisms

LMU

m

2

Heißig, Philipp

Oligonucleotides for enhancing intracellular delivery and monitoring intracellular stability of synthetic RNAi nanoagents

LMU

m

2

Klein, Philipp

Redox-sensitive and receptor-targeted sequence-defined, cationic carriers for nucleic acid delivery

LMU

m

2

Datz, Stefan

Multifunctional mesoporous nanoparticles for drug delivery

LMU

m

2

von Schirnding, Constantin

Mesoporous metal phosphate-citrate nanoparticles as anti-cancer agents

LMU

m

2

Gegenfurter, Florian

Actin-dependent mechanosensing in cells

LMU

m

2

Frank, James Allen

Photoswitchable lipids: targeting the membrane with photopharmacology

LMU

m

2

Huber, Florian

The total synthesis of (−)-nitidasin, synthetic studies toward astellatol and retigeranic acid B, and development of novel photochromic ligands for L-type voltage-gated calcium channels: and development of novel photochromatic ligands for L-type coltage calcium channels

LMU

m

2

Leippe, Philipp

Tethered photopharmacology

LMU

m

2

Illes, Bernhard

Nanotools for cancer research and therapy

MPI

m

2

Kretschmer, Simon

Molecular determinants of Min protein pattern formation

TUM

m

2

Hinzpeter, Florian

Kinetics of spatially organized biochemical reactions: optimal strategies and underlying physical principles

TUM

m

2

Grumbein, Stefan

Material properties of bacterial biofilms

TUM

m

2

Käsdorf, Benjamin

Structure-function relations of biological hydrogel macromolecules

TUM

m

2

Nowald, Constantin

Nanoparticle/Biopolymer Systems for Medical Applications

TUM

m

2

Schwarz-Schilling, Matthaeus

Cell-free Expression Systems: a Bottom-Up Approach to Synthetic Biology

LMU

f

3

Dirscherl, Christina

Thermal non-equilibria promote prebiotic DNA and RNA polymerization

LMU

f

3

Kilwing, Luzia

Toward nanoscale rapid prototyping: development and characterization of DNA-based platforms for multivalent interactions and locomotion

LMU

f

3

Ober, Martina

Photoswitching of lipids and silicification of DNA origami objects probed by small-angle X-ray scattering

LMU

f

3

Pritzl, Stefanie

Optical Nanoagents in Phospholipid Membranes: Controlling Bilayer Properties with Light

LMU

f

3

Schaffer, Sophia

Cytoskeletal dynamics in confined cell migration: experiment and modelling = Zytoskelettdynamik in räumlich begrenzter Zellmigration: Experiment und Modellierung

LMU

f

3

Bartnik, Kira

Single-molecule FRET studies of protein function and conformational dynamics: from DNA nanotechnology to viral and bacterial infections

LMU

f

3

Haase (Freitag), Franziska

A novel class of mRNA lipid nanoparticles (LNPs) optimized by the chemical evolution approach

LMU

f

3

Köhler, Bianca

MicroRNA-200c as Chemosensitizer and Metastasis Suppressor: Novel Insights from In Vitro and In Vivo Investigations

LMU

f

3

Wehl (Haddick), Lisa

Biocompatible Nanocarriers for Drug Delivery Application

LMU

f

3

Hörterer, Elisa Sophie

MicroRNA 200c and its effects on breast cancer and chemotherapy in a xenograft model

LMU

m

3

Bauer, Magnus

Mechanoactivation of protein kinases

LMU

m

3

Kudella, Patrick

Sequence self-selection by the network dynamics of random ligating oligomer pools

LMU

m

3

Stein, Julian

Stability of a time-homogeneous system of money and antimoney & kinetic microscale thermophoresis

LMU

m

3

Brunner, Korbinian

Entwicklung und Anwendung komplexer siRNA-Strukturen

LMU

m

3

Wiedemann, Stephan

Präbiotische Synthese der Pyrimidinnukleoside sowie Entwicklung eines neuen Mechanismus zur Stickstofffixierung aus redox-neutraler Atmosphäre

LMU

m

3

Maier, Christoph

Optically induced forces on anisotropic plasmonic nanoparticles

LMU

m

3

Schuknecht, Francis

Gold Nanorod-Based Dimers with accessible Hotspots for Surface-Enhanced Raman Spectroscopy

LMU

m

3

Urban, Patrick

optical control of lipid interaction in photolipid membranes

LMU

m

3

Brauns, Fridtjof

Principles and theory of protein-based pattern formation

LMU

m

3

Goychuk, Andriy

Interplay between mechanics and chemistry across different scales: from protein to cell dynamics and morphogenesis

LMU

m

3

Hassan, Laeschkir

Mass Conserving Reaction-Diffusion Dynamics

LMU

m

3

Kempf, Felix

Invasion of soft active matter into capillaries: a study of selected models and geometries

LMU

m

3

Krüger, Timo

Order formation and patterns in large scale active matter systems: from microscopic processes to emergent phenomena

LMU

m

3

Wilke, Patrick

On the role of stochasticity in biochemical systems far from thermal equilibrium: how fluctuations affect phenomenology

LMU

m

3

Agam, Ganesh

Single-molecule spectroscopy: investigations of protein folding to multi-laboratory consistencies on proteins

LMU

m

3

Danaf, Nader

Advanced fluorescence methodologies for the exploration of the nanoworld

LMU

m

3

Fuchs, Adrian

From biology to material sciences: a combined multimodal micro-spectroscopy platform for in vivo and in situ analysis.

LMU

m

3

Benli-Hoppe, Teoman

Cationic carrier supported peptide-based nanosystems for tumor targeting

LMU

m

3

Loy (Wendel), Dominik

Development of an automated micromixer for the controlled formulation of multi-component polyplexes

LMU

m

3

Rüdiger, Daniel

Mechanical communication of endothelial cells and its influence on the organization of cellular structures

LMU

m

3

Gao, Li

Use of styrylbenzothiazole photoswitches in drugs for spatiotemporal control over microtubule-dependent biology

LMU

m

3

Müller-Deku, Adrian

Azobenzene photoswitches: synthetic methodology and biological applications

LMU

m

3

Sailer, Alexander

Hemithioindigos for cellular tubulin photopharmacology: From proof of concept to near-quantitatively photoswitchable tools with single-cell precision

LMU

m

3

Geiger, Florian

Directed invasion and migratory modes of cancer cells in structured 3D collagen matrices

LMU

m

3

Brückner, David

Stochastic dynamics of migrating cells: a data-driven approach

LMU

m

3

Gradziuk, Grzegorz

Detecting, quantifying and interpreting irreversibility in linear systems

LMU

m

3

Baumgartner, Benedikt

Azobenzene photoswitches for near-infrared modulation of bioactivity and high-performance imaging applications

LMU

m

3

Bohlen, Johann

Expanding the scope of single-molecule energy transfer with gold nanoparticles and graphene

LMU

m

3

Felber, Jan

Rational development of stabilized cyclic disulfide redox probes and bioreductive prodrugs to target dithiol oxidoreductases

LMU

m

3

Flommersfeld, Johannes

The role of the physical microenvironment in cell migration and cytoskeletal force generation

LMU

m

3

Geiger, Philipp

Network topology and robustness of coexistence in the antisymmetric Lotka-Volterra equation

LMU

m

3

Grabenhorst, Lennart

DNA origami based tools for the investigation of biomolecular interactions

LMU

m

3

Kick, Leonhard

Sequence-dependence in intein mediated protein trans-splicing reactions Function and structure of the Type VI CRISPR nuclease Cas13a from Rhodobacter capsulatu

LMU

m

3

Martens, Kevin

DNA nanostructures in advanced plasmonic applications

LMU

m

3

Matreux, Thomas

Geothermal microfluidic systems foster prebiotic chemistry

LMU

m

3

Muramatsu, David

A theoretical analysis of Thymus morphogenesis

LMU

m

3

Pauer, Christoph

Downscaling Dynamic Magnetic Systems: From Microswimmers to Nanorotors

LMU

m

3

Reichl, Andreas

Modified Nucleotides and Nucleic Acids for the Elucidation of Epigenetic Mechanisms

LMU

m

3

Schröder, Tim

Connecting Excited State Lifetime and Intensity Correlations for Quantitative Analysis of Chromophore Interactions

LMU

m

3

Striebel, Moritz

Self-organization pathways in active filament bundles

LMU

m

3

Stöberl, Stefan

Quantitative Cell Migration in 3D Compliant Hydrogel Microenvironments

LMU

m

3

Wanninger, Simon

Advancing single-molecule imaging analysis via deep learning

LMU

m

3

Weingart, Maximilian

Dynamic Environments at the Origins of Life: Alkaline Vent Microfluidics in two and three Dimensions and Nucleoside Synthesis in prebiotically plausible Conditions

LMU

m

3

Würthner, Laeschkir

Self-organization in heterogeneous biological systems: how geometric and biochemical cues control pattern formation

LMU

m

3

Zähringer, Jonas

Pulsed-Interleaved MINFLUX Super-Resolution Microscopy

LMU

f

3

Brieger, Emily

Data-Driven Discovery of Cell-Cell Interaction Mechanisms

LMU

f

3

Calaça Serrão, Adriana

Nucleic acid phase separation and replication drive selection in prebiotic pools

LMU

f

3

Hoyer, Maria

Measurement and analysis of the first assembly steps in protein polymerization

LMU

f

3

Hörterer, Elisa

MicroRNA 200c and its effects on breast cancer and chemotherapy in a xenograft model

LMU

f

3

Hübner, Kristina

Designing single-molecule assays towards directed emission with DNA origami nanoantennas

LMU

f

3

Kersten, Corinna

Design and characterisation of fluorescent light-up aptamers as sensors for small non-coding RNAs

LMU

f

3

Korytiaková, Eva

Synthese und Untersuchung chemisch modifizierter epigenetisch relevanter DNA-Modifikationen

LMU

f

3

Kraus, Yvonne

Photoswitchable and non-photoswitchable tubulin inhibitors for applications in cell biology

LMU

f

3

Nainyte, Milda

Synthesis of modified oligonucleotides for prebiotic studies and as novel CoV-2 therapeutics

LMU

f

3

Ochmann, Sarah

Optical single-molecule biosensors assembled by DNA origami

LMU

f

3

Pfeiffer, Martina

Smart DNA Origami Biosensors and Nanorobots with Allosteric Information Transfer

LMU

f

3

Pöhmerer, Jana

RNA Medicines in vivo: Delivery of mRNA, siRNA, PMOs and Cas9 mRNA/sgRNA

LMU

f

3

Sahin, Hanife

Development of new TET enzymes for modern sequencing methods

MPI

f

3

Heermann, Tamara

Mechanistic Analysis of the Membrane-Associated MinDE Reaction Cycle

TUM

m

3

Giunta, Giovanni

Spatio-Temporal Organization of Enzymatic Reactions

TUM

m

3

Kremser, Stephan

Computational Models for Cellular Pattern Formation with Local Interactions

TUM

m

3

Wolff, Michael

Nucleosome occupancy and dynamics in yeast: genome-wide and promoter-level analyses and modeling

TUM

m

3

Buchmann, Benedikt

The role of plastic collagen remodeling during structure formation of human mammary gland organoids

TUM

m

3

Dehne, Henry

Dynamic structure formation of DNA-coated colloids guided by enzymatic reactions

TUM

m

3

Dehne, Henry

Dynamic structure formation of DNA-coated colloids guided by enzymatic reactions

TUM

f

3

Bojer, Mareike

Cellular Automata, from Theory to Applications in Biological Pattern Formation